The inverse scattering approach for the defocusing Davey–Stewartson II equation is given by a system of D-bar equations. We present a numerical approach to semi-classical D-bar problems for real analytic rapidly decreasing potentials. We treat the D-bar problem as a complex linear second order integral equation which is solved with discrete Fourier transforms complemented by a regularization of the singular parts by explicit analytic computation. The resulting algebraic equation is solved either by fixed point iterations or GMRES. Several examples for small values of the semi-classical parameter in the system are discussed.